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Fengbo Ma, Jiaheng Cui, Amit Kumar, Yanjun Yang, Xianyan Chen, Yiping Zhao* "Comprehensive Open-Source Ecosystem for SERS Spectroscopy: Introducing SpectraGuru", Anal. Chem. 2026, 98, 15, 11186–11196.
YYanjun Yang, Yufang Liu, Haoran Lu, Jiaheng Cui, Les Jones, Jackelyn Murray, Ralph A. Tripp, Xianyan Chen, Wenxuan Zhong, Ping Ma, and Yiping Zhao, “AI-assisted extraction and quantification of viral RNA SERS spectra from DNA–RNA hybridization measurement”, Proc. SPIE 13870, Frontiers in Biological Detection: From Nanosensors to Systems XVIII, 1387005 (5 March 2026).
Fengbo Ma, Jiaheng Cui, Amit Kumar, Yanjun Yang, Jessica McCabe Hutcheson, Xianyan Chen, Haijian Sun, and Yiping Zhao, “SpectraGuru: a community-guided path toward scalable Raman and SERS analysis”, Proc. SPIE 13846, Biomedical Vibrational Spectroscopy 2026: Advances in Research and Industry, 1384608 (5 March 2026).
Jiaheng Cui#, Chenyao Feng# (equal contribution), Xulan Chen, Yanjun Yang, Pengju Yin*, Yiping Zhao*, “Improving Protein Quantification with SERS Superspectra and Machine Learning,” ACS Omega 2026, 11, 6, 10843–10853.
Jiaheng Cui, Yanjun Yang*, Amit Kumar, Jackelyn Murray, Les Jones, Xianyan Chen, Ralph A Tripp, Yiping Zhao* "Quantitative Analysis of Virus Adsorption and Co-adsorption Behavior Using BET Modeling and SERS Spectroscopy", J. Phys. Chem. A 2025, 129, 35, 8204–8219.
Jiaheng Cui, Xianyan Chen, and Yiping Zhao* "Beyond Traditional airPLS: Improved Baseline Removal in SERS with Parameter-Focused Optimization and Prediction", Analytical Chemistry 2025, 97, 30, 16211–16218.
Yufang Liu, Yanjun Yang, Haoran Lu, Jiaheng Cui, Xianyan Chen, Ping Ma*, Wenxuan Zhong*, and Yiping Zhao* "Extracting True Virus SERS Spectra and Augmenting Data for Improved Virus Classification and Quantification", ACS Sens. 2025, 10 (6), 3941–3952
Yanjun Yang, Jiaheng Cui, Amit Kumar, Dan Luo, Jackelyn Murray, Les Jones, Xianyan Chen, Sebastian Hülck, Ralph A. Tripp, and Yiping Zhao* "Label-free detection of respiratory virus co-infections: integrating surface-enhanced Raman scattering with deep learning", Proc. SPIE 13298, Photonic Diagnosis, Monitoring, Prevention, and Treatment of Infections and Inflammatory Diseases 2025, 1329802 (19 March 2025)
Yanjun Yang, Jiaheng Cui, Amit Kumar, Dan Luo, Jackelyn Murray, Les Jones, Xianyan Chen, Sebastian Hülck, Ralph A. Tripp, and Yiping Zhao*, "Multiplex Detection and Quantification of Virus Co-Infections Using Label-free Surface-Enhanced Raman Spectroscopy and Deep Learning Algorithms", ACS Sensors, 2025 10 (2), 1298-1311
Wang, Tao and Yang, Yanjun and Lu, Haoran and Cui, Jiaheng and Chen, Xianyan and Ma, Ping* and Zhong, Wenxuan* and Zhao, Yiping*, "Functional Regression for SERS Spectrum Transformation Across Diverse Instruments", Analyst, 2025, 150, 460-469
Joshua Curtis Rothstein, Jiaheng Cui*, Yanjun Yang, Xianyan Chen and Yiping Zhao*, "Ultra-Sensitive Detection of PFASs using Surface Enhanced Raman Scattering and Machine Learning: A Promising Approach for Environmental Analysis", Sensors & Diagnostics 2024 3(8): 1272-1284.
Yanjun Yang, Hao Li, Dan Luo, Jiaheng Cui, Amit Kumar, Leslie Jones, Jackelyn Crabtree, Hemant Naikare, Yung-Yi C. Mosley, Teddy Spikes, Sebastian Hülck, Xianyan Chen, Ralph A. Tripp, Bin Ai, Yiping Zhao*, "Detection of SARS-CoV-2 in patient specimens by surface enhanced Raman spectroscopy and deep learning," Optical Sensing and Detection VIII. Vol. 12999. SPIE, 2024.
Yanjun Yang, Jiaheng Cui, Dan Luo, Jackelyn Murray, Xianyan Chen, Sebastian Hülck, Ralph Tripp, and Yiping Zhao*, "Rapid Detection of SARS-CoV-2 Variants Using ACE2-Based SERS Sensor Enhanced by CoVari Deep Learning Algorithms", ACS Sensors 2024 9 (6), 3158-3169
Yangxiu Chen, Yanjun Yang, Jiaheng Cui, Hong Zhang*, Yiping Zhao*, "Decoding PFAS contamination via Raman spectroscopy: A combined DFT and machine learning investigation.", Journal of Hazardous Materials, Volume 465, 2024, 133260, ISSN 0304-3894.